| 2020 | The Magnificent Monsters of Cedar Street | Kirkus Best Books of the Year source ↗ (opens in a new tab) | Selection · Middle Grade | |
| 2020 | The Magnificent Monsters of Cedar Street | School Library Journal Best Books of the Year source ↗ (opens in a new tab) | Selection · Middle Grade | |
| 2016 | Curiosity House: The Shrunken Head | Edgar Allan Poe Awards source ↗ (opens in a new tab) | Nominee · Best Juvenile | |
| 2016 | Replica | Kirkus Best Books of the Year source ↗ (opens in a new tab) | Selection · Teen | |
| 2014 | Panic | Goodreads Choice Awards source ↗ (opens in a new tab) | Nominee · Young Adult Fiction | |
| 2013 | Requiem | Goodreads Choice Awards source ↗ (opens in a new tab) | Nominee · Young Adult Fantasy | |
| 2012 | Pandemonium | Goodreads Choice Awards source ↗ (opens in a new tab) | Nominee · Goodreads Author | |
| 2012 | Pandemonium | Goodreads Choice Awards source ↗ (opens in a new tab) | Nominee · Young Adult Fantasy | |
| 2012 | The Spindlers | Kirkus Best Books of the Year source ↗ (opens in a new tab) | Selection · Children's | |
| 2012 | The Spindlers | School Library Journal Best Books of the Year source ↗ (opens in a new tab) | Selection · Fiction | |
| 2012 | Pandemonium | Kirkus Best Books of the Year source ↗ (opens in a new tab) | Selection · Teen | |
| 2011 | Delirium | Goodreads Choice Awards source ↗ (opens in a new tab) | Nominee · Favorite Book of 2011 | |
| 2011 | Delirium | Goodreads Choice Awards source ↗ (opens in a new tab) | Nominee · Goodreads Author | |
| 2011 | Liesl & Po | Goodreads Choice Awards source ↗ (opens in a new tab) | Nominee · Middle Grade & Children's | |
| 2011 | Delirium | Goodreads Choice Awards source ↗ (opens in a new tab) | Nominee · Young Adult Fantasy | |
| 2011 | Delirium | Chicago Public Library Best of the Best source ↗ (opens in a new tab) | Selection · Best Teen Fiction | |
| 2011 | Liesl & Po | Kirkus Best Books of the Year source ↗ (opens in a new tab) | Selection · Children's | |
| 2011 | Delirium | Kirkus Best Books of the Year source ↗ (opens in a new tab) | Selection · Teen | |
| 2011 | Delirium: The Special Edition | Amazon Editors' Best Books of the Year source ↗ (opens in a new tab) | Selection · Top 100 | |
| 2010 | Before I Fall | Goodreads Choice Awards source ↗ (opens in a new tab) | Winner · Young Adult Fiction | |
| 2010 | Before I Fall | Publishers Weekly Best Books source ↗ (opens in a new tab) | Selection · Children's Fiction | |
| 2010 | Before I Fall | Amazon Editors' Best Books of the Year source ↗ (opens in a new tab) | Selection · Top 100 | |